BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A08SP1|AL425966
(807 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1557 0.0
>3x_Contig1806
Length = 53694
Score = 1557 bits (784), Expect = 0.0
Identities = 804/810 (99%), Gaps = 3/810 (0%)
Strand = Plus / Minus
Query: 1 aatcgttacnttcaagttgcacgttgtttccgagacgaggatcttagaagcgataggcaa 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2253 aatcgttactttcaagttgcacgttgtttccgagacgaggatcttagaagcgataggcaa 2194
Query: 61 ccagaattcacccaagtcgatttagaaatggcattttcttctgggaaagatgttagagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2193 ccagaattcacccaagtcgatttagaaatggcattttcttctgggaaagatgttagagag 2134
Query: 121 gtagttgaaaaagtaattacaagtacatggaataagctccacgctag--gcactgacctt 178
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2133 gtagttgaaaaagtaattacaagtacatggaataagctccacgctagtggcactgacctt 2074
Query: 179 catacattggataggacaggtaagatcatcccagtctcaggtacagaaaagatcataaat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2073 catacattggataggacaggtaagatcatcccagtctcaggtacagaaaagatcataaat 2014
Query: 239 ttaacgtaccagcaggttatgactcaatacggtattgacaaaccagaccttaggtatccg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2013 ttaacgtaccagcaggttatgactcaatacggtattgacaaaccagaccttaggtatccg 1954
Query: 299 gacttgaaacttatggatctttctgaattcaaagcttacggatacacgaataaggaattt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1953 gacttgaaacttatggatctttctgaattcaaagcttacggatacacgaataaggaattt 1894
Query: 359 ccagtatttgaggtcatagttttacgcaaagcttttgaaaccgttgaggaatttcacaga 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1893 ccagtatttgaggtcatagttttacgcaaagcttttgaaaccgttgaggaatttcacaga 1834
Query: 419 gactggagttatttgtctaacaaggataattacaactatagagctcccattgtcgttcca 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1833 gactggagttatttgtctaacaaggataattacaactatagagctcccattgtcgttcca 1774
Query: 479 attgaatcagatgaattaggtacctcatggttcactaaattcttgccaattgctgctttt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1773 attgaatcagatgaattaggtacctcatggttcactaaattcttgccaattgctgctttt 1714
Query: 539 gagaatccaaaattgataacgaagttccttaatttaaggaaaggtgacattattatcggc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1713 gagaatccaaaattgataacgaagttccttaatttaaggaaaggtgacattattatcggc 1654
Query: 599 tccaccagagaacctagtagaaggctttttgaaaatcctactccactaggtagagcccgt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1653 tccaccagagaacctagtagaaggctttttgaaaatcctactccactaggtagagcccgt 1594
Query: 659 caactaataacgc-rtcgaaaagaggaaaagaacttttccgtaagactgatgcttcggta 717
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1593 caactaataacgcagtcgaaaagaggaaaagaacttttccgtaagactgatgcttcggta 1534
Query: 718 gctgcatgggttgtcgatttccccttatttgccccagttgaggaaaccgcggaaaaaggc 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1533 gctgcatgggttgtcgatttccccttatttgccccagttgaggaaaccgcggaaaaaggc 1474
Query: 778 agtbactatccagtgtacactgaaaatgca 807
||| ||||||||||||||||||||||||||
Sbjct: 1473 agtcactatccagtgtacactgaaaatgca 1444
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5276
Number of Sequences: 1807
Number of extensions: 5276
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 807
length of database: 10,358,551
effective HSP length: 16
effective length of query: 791
effective length of database: 10,329,639
effective search space: 8170744449
effective search space used: 8170744449
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)